Transcript: Zm00001eb255580_T003

Description

Zm00001e015913

Location

Chromosome 5: 217,491,674-217,494,575 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 12 domains and features, is associated with 528 variant alleles and maps to 46 oligo probes.

Gene

This transcript is a product of gene Zm00001eb255580 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	Zm00001eb255580_T002	962	144aa	Zm00001eb255580_P002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6HKZ3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Zm00001eb255580_T001	1000	132aa	Zm00001eb255580_P001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A096R205 A0A3L6EPP6 B6UF39 C4J386	-
-	Zm00001eb255580_T003	900	132aa	Zm00001eb255580_P003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A096R205 A0A3L6EPP6	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 900 bps, Translation length: 132 residues

Version

Zm00001eb255580_T003

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Transcript: Zm00001eb255580_T003

Summary

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Transcript: Zm00001eb255580_T003

Summary

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