Transcript: Zm00001eb248190_T002

Description

Zm00001e015202

Location

Chromosome 5: 192,220,437-192,232,433 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 9 domains and features, is associated with 103 variant alleles and maps to 20 oligo probes.

Gene

This transcript is a product of gene Zm00001eb248190 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	Zm00001eb248190_T004	1131	157aa	Zm00001eb248190_P004	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B4FA99	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Zm00001eb248190_T001	1111	157aa	Zm00001eb248190_P001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B4FA99	-	-
-	Zm00001eb248190_T003	1010	157aa	Zm00001eb248190_P003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B4FA99	-	-
-	Zm00001eb248190_T002	803	138aa	Zm00001eb248190_P002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6HE54	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 803 bps, Translation length: 138 residues

Version

Zm00001eb248190_T002

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Transcript: Zm00001eb248190_T002

Summary

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Transcript: Zm00001eb248190_T002

Summary

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