Transcript: Zm00001eb246860_T001

Description

Zm00001e015083

Location

Chromosome 5: 187,369,606-187,374,466 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 8 domains and features and is associated with 908 variant alleles.

Gene

This transcript is a product of gene Zm00001eb246860 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	Zm00001eb246860_T003	1898	446aa	Zm00001eb246860_P003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B4FII0	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Zm00001eb246860_T002	1822	446aa	Zm00001eb246860_P002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B4FII0	-	-
-	Zm00001eb246860_T001	1782	446aa	Zm00001eb246860_P001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B4FII0	-	-
-	Zm00001eb246860_T004	1319	319aa	Zm00001eb246860_P004	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B4FIA2	-	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 1,782 bps, Translation length: 446 residues

Version

Zm00001eb246860_T001

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Transcript: Zm00001eb246860_T001

Summary

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Transcript: Zm00001eb246860_T001

Summary

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