Transcript: Zm00001eb228320_T002

Description

Zm00001e013304

Location

Chromosome 5: 64,084,402-64,086,560 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 15 domains and features, is associated with 513 variant alleles and maps to 55 oligo probes.

Gene

This transcript is a product of gene Zm00001eb228320 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	Zm00001eb228320_T002	1921	406aa	Zm00001eb228320_P002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Zm00001eb228320_T001	1802	388aa	Zm00001eb228320_P001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B4FU30	-
-	Zm00001eb228320_T003	1694	390aa	Zm00001eb228320_P003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6GWK9 A0A1D6GWL0 A0A3L6EVM3 B4G0M3	-
-	Zm00001eb228320_T004	1399	232aa	Zm00001eb228320_P004	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 1,921 bps, Translation length: 406 residues

Version

Zm00001eb228320_T002

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Transcript: Zm00001eb228320_T002

Summary

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Transcript: Zm00001eb228320_T002

Summary

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