Transcript: Zm00001eb227800_T003

Description

Zm00001e013256

Location

Chromosome 5: 61,996,450-61,999,069 forward strand.

About this transcript

This transcript has 2 exons, is annotated with 12 domains and features, is associated with 507 variant alleles and maps to 52 oligo probes.

Gene

This transcript is a product of gene Zm00001eb227800 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	Zm00001eb227800_T004	2325	345aa	Zm00001eb227800_P004	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Zm00001eb227800_T002	2622	225aa	Zm00001eb227800_P002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
-	Zm00001eb227800_T003	2421	339aa	Zm00001eb227800_P003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6GW76 A0A3L6ESY9	-	-
-	Zm00001eb227800_T001	2139	345aa	Zm00001eb227800_P001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 2,421 bps, Translation length: 339 residues

Version

Zm00001eb227800_T003

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Transcript: Zm00001eb227800_T003

Summary

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Transcript: Zm00001eb227800_T003

Summary

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