Transcript: Zm00001eb222870_T003

Description

Zm00001e012791

Location

Chromosome 5: 34,732,653-34,736,096 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 6 domains and features, is associated with 389 variant alleles and maps to 47 oligo probes.

Gene

This transcript is a product of gene Zm00001eb222870 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	Zm00001eb222870_T002	1461	257aa	Zm00001eb222870_P002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6GQC1 A0A1D6GQC2 A0A1D6GQC3 B4FHH6 B6TFQ6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Zm00001eb222870_T001	1610	193aa	Zm00001eb222870_P001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6GQC6 C0PF75	-
-	Zm00001eb222870_T003	1318	193aa	Zm00001eb222870_P003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 7, Coding exons: 5, Transcript length: 1,318 bps, Translation length: 193 residues

Version

Zm00001eb222870_T003

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Transcript: Zm00001eb222870_T003

Summary

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Transcript: Zm00001eb222870_T003

Summary

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