Transcript: Zm00001eb218770_T001

Description

Zm00001e012414

Location

Chromosome 5: 18,166,579-18,170,499 forward strand.

About this transcript

This transcript has 11 exons, is annotated with 6 domains and features and maps to 27 oligo probes.

Gene

This transcript is a product of gene Zm00001eb218770 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	Zm00001eb218770_T002	1103	229aa	Zm00001eb218770_P002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1X7YGH5 A0A1X7YGK1 A0A3L6EN36 B6TQT7 C0PMS4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Zm00001eb218770_T001	1291	212aa	Zm00001eb218770_P001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Zm00001eb218770_T003	1024	163aa	Zm00001eb218770_P003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 1,291 bps, Translation length: 212 residues

Version

Zm00001eb218770_T001

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Transcript: Zm00001eb218770_T001

Summary

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Transcript: Zm00001eb218770_T001

Summary

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