Transcript: Zm00001eb212170_T003

Description

Zm00001e011790

Location

Chromosome 5: 3,345,961-3,348,569 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 16 domains and features, is associated with 632 variant alleles and maps to 45 oligo probes.

Gene

This transcript is a product of gene Zm00001eb212170 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	Zm00001eb212170_T002	1160	183aa	Zm00001eb212170_P002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6GEU7	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Zm00001eb212170_T003	1289	181aa	Zm00001eb212170_P003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B4FFK3	-	-
-	Zm00001eb212170_T001	1024	181aa	Zm00001eb212170_P001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6GEU6 A0A3L6ETV9 B4FFK3 P49076	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,289 bps, Translation length: 181 residues

Version

Zm00001eb212170_T003

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Transcript: Zm00001eb212170_T003

Summary

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Transcript: Zm00001eb212170_T003

Summary

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