Transcript: Zm00001eb211300_T002

Description

Zm00001e011707

Location

Chromosome 5: 2,126,403-2,129,842 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 6 domains and features, is associated with 520 variant alleles and maps to 78 oligo probes.

Gene

This transcript is a product of gene Zm00001eb211300 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	Zm00001eb211300_T001	1486	331aa	Zm00001eb211300_P001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6GDU7 A0A1D6GDU9 A0A3L6EIS7 A0A3L6EK89 B6TXX8 B6U9L8 C0PGW3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Zm00001eb211300_T002	2378	194aa	Zm00001eb211300_P002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6GDU8	-	-
-	Zm00001eb211300_T003	1486	331aa	Zm00001eb211300_P003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C0PGW3	-	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 2,378 bps, Translation length: 194 residues

Version

Zm00001eb211300_T002

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Transcript: Zm00001eb211300_T002

Summary

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Transcript: Zm00001eb211300_T002

Summary

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