Transcript: Zm00001eb209000_T003

Description

Zm00001e025313

Location

Chromosome 4: 247,877,740-247,880,932 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 3 domains and features, is associated with 857 variant alleles and maps to 39 oligo probes.

Gene

This transcript is a product of gene Zm00001eb209000 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	Zm00001eb209000_T001	1111	243aa	Zm00001eb209000_P001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6QU19 A0A3L6F6M4 B6TLY8 C0P4U8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Zm00001eb209000_T002	1140	183aa	Zm00001eb209000_P002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6QU21	-
-	Zm00001eb209000_T003	987	226aa	Zm00001eb209000_P003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 987 bps, Translation length: 226 residues

Version

Zm00001eb209000_T003

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Transcript: Zm00001eb209000_T003

Summary

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Transcript: Zm00001eb209000_T003

Summary

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