Transcript: Zm00001eb208250_T003

Description

Zm00001e025247

Location

Chromosome 4: 246,691,348-246,696,565 reverse strand.

About this transcript

This transcript has 12 exons, is annotated with 9 domains and features, is associated with 587 variant alleles and maps to 31 oligo probes.

Gene

This transcript is a product of gene Zm00001eb208250 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	Zm00001eb208250_T001	2634	568aa	Zm00001eb208250_P001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6QTB4 A0A1D6QTB5 A0A3L6F9X9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Zm00001eb208250_T002	2674	410aa	Zm00001eb208250_P002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6JCM9 A0A1D6QP66 A0A1D6QP67	-
-	Zm00001eb208250_T003	2599	333aa	Zm00001eb208250_P003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 12, Coding exons: 9, Transcript length: 2,599 bps, Translation length: 333 residues

Version

Zm00001eb208250_T003

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Transcript: Zm00001eb208250_T003

Summary

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Transcript: Zm00001eb208250_T003

Summary

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