Transcript: Zm00001eb198120_T003

Description

Zm00001e024227

Location

Chromosome 4: 198,985,381-198,987,777 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 7 domains and features, is associated with 803 variant alleles and maps to 46 oligo probes.

Gene

This transcript is a product of gene Zm00001eb198120 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	Zm00001eb198120_T002	1669	258aa	Zm00001eb198120_P002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	K7UBG8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Zm00001eb198120_T001	1730	250aa	Zm00001eb198120_P001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3L6F7T7	-
-	Zm00001eb198120_T003	1211	258aa	Zm00001eb198120_P003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	K7UBG8	-
-	Zm00001eb198120_T004	1123	258aa	Zm00001eb198120_P004	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B6UAJ1 K7UBG8	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 1,211 bps, Translation length: 258 residues

Version

Zm00001eb198120_T003

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Transcript: Zm00001eb198120_T003

Summary

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Transcript: Zm00001eb198120_T003

Summary

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