Transcript: Zm00001eb197040_T003

Description

Zm00001e024141

Location

Chromosome 4: 194,575,808-194,583,221 reverse strand.

About this transcript

This transcript has 13 exons, is annotated with 18 domains and features, is associated with 1126 variant alleles and maps to 30 oligo probes.

Gene

This transcript is a product of gene Zm00001eb197040 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	Zm00001eb197040_T003	2430	486aa	Zm00001eb197040_P003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A060CX87 A0A1D6QHQ8 C0PCW0 U3PWN2	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Zm00001eb197040_T001	2655	380aa	Zm00001eb197040_P001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3L6F0E1	-	-
-	Zm00001eb197040_T002	2424	486aa	Zm00001eb197040_P002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C0PCW0	-	-

Summary

Statistics

Exons: 13, Coding exons: 12, Transcript length: 2,430 bps, Translation length: 486 residues

Version

Zm00001eb197040_T003

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Transcript: Zm00001eb197040_T003

Summary

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Transcript: Zm00001eb197040_T003

Summary

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