Transcript: Zm00001eb194380_T001

Description

Zm00001e023888

Location

Chromosome 4: 186,607,860-186,662,350 forward strand.

About this transcript

This transcript has 21 exons, is annotated with 11 domains and features, is associated with 2883 variant alleles and maps to 27 oligo probes.

Gene

This transcript is a product of gene Zm00001eb194380 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	Zm00001eb194380_T001	2176	541aa	Zm00001eb194380_P001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6QEH3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Zm00001eb194380_T002	2089	295aa	Zm00001eb194380_P002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Zm00001eb194380_T003	935	200aa	Zm00001eb194380_P003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6QEH6 A0A3L6F3D8 B6TAM2	-

Summary

Statistics

Exons: 21, Coding exons: 17, Transcript length: 2,176 bps, Translation length: 541 residues

Version

Zm00001eb194380_T001

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Transcript: Zm00001eb194380_T001

Summary

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Transcript: Zm00001eb194380_T001

Summary

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