Transcript: Zm00001eb190590_T002

Description

Zm00001e023518

Location

Chromosome 4: 173,815,133-173,819,342 reverse strand.

About this transcript

This transcript has 12 exons, is annotated with 11 domains and features, is associated with 410 variant alleles and maps to 17 oligo probes.

Gene

This transcript is a product of gene Zm00001eb190590 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	Zm00001eb190590_T003	3408	849aa	Zm00001eb190590_P003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6QA04 A0A1D6QA05 A0A1D6QA06 A0A3L6F2C0	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Zm00001eb190590_T001	3365	623aa	Zm00001eb190590_P001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
-	Zm00001eb190590_T002	3326	629aa	Zm00001eb190590_P002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6K2E7 A0A1D6K2H0	-	-

Summary

Statistics

Exons: 12, Coding exons: 11, Transcript length: 3,326 bps, Translation length: 629 residues

Version

Zm00001eb190590_T002

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Transcript: Zm00001eb190590_T002

Summary

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Transcript: Zm00001eb190590_T002

Summary

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