Transcript: Zm00001eb172410_T004

Description

Zm00001e021721

Location

Chromosome 4: 34,191,672-34,195,733 forward strand.

About this transcript

This transcript has 8 exons, is annotated with 8 domains and features, is associated with 764 variant alleles and maps to 88 oligo probes.

Gene

This transcript is a product of gene Zm00001eb172410 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	Zm00001eb172410_T003	2653	661aa	Zm00001eb172410_P003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6PVX4 B8A0H2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Zm00001eb172410_T002	2738	603aa	Zm00001eb172410_P002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Zm00001eb172410_T001	2650	660aa	Zm00001eb172410_P001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6PVX3 A0A3L6EWU3	-
-	Zm00001eb172410_T004	2550	512aa	Zm00001eb172410_P004	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 8, Coding exons: 6, Transcript length: 2,550 bps, Translation length: 512 residues

Version

Zm00001eb172410_T004

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Transcript: Zm00001eb172410_T004

Summary

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Transcript: Zm00001eb172410_T004

Summary

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