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Zea mays (Zm-B73-REFERENCE-NAM-5.0) ▼

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Transcript: Zm00001eb171180_T003

Description

Zm00001e021590

Location

Chromosome 4: 28,742,813-28,811,495 forward strand.

About this transcript

This transcript has 19 exons, is annotated with 20 domains and features, is associated with 2646 variant alleles and maps to 65 oligo probes.

Gene

This transcript is a product of gene Zm00001eb171180 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
-Zm00001eb171180_T0023370986aaZm00001eb171180_P002
 
Protein coding
A0A1D6PU88 A0A1D6PU89 A0A1D6PU90
A0A1D6PU91 A0A1D6PU92 A0A1D6PU93
A0A1D6PU96 A0A1D6PU98 A0A1D6PU99
A0A1D6PUA0 A0A1D6PUA1 		-Ensembl Canonical
-Zm00001eb171180_T0033202535aaZm00001eb171180_P003
 
Protein coding
---
-Zm00001eb171180_T0013178922aaZm00001eb171180_P001
 
Protein coding
A0A3L6F1U5 K7TWG9 K7UAT1
--
-Zm00001eb171180_T0043084728aaZm00001eb171180_P004
 
Protein coding
A0A1D6PU94 --
-Zm00001eb171180_T0053026670aaZm00001eb171180_P005
 
Protein coding
A0A1D6PUA9 --

Summary

Statistics

Exons: 19, Coding exons: 12, Transcript length: 3,202 bps, Translation length: 535 residues

Version

Zm00001eb171180_T003

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.