Transcript: Zm00001eb170650_T001

Description

Zm00001e021538

Location

Chromosome 4: 26,396,474-26,428,228 reverse strand.

About this transcript

This transcript has 13 exons, is annotated with 14 domains and features and is associated with 1921 variant alleles.

Gene

This transcript is a product of gene Zm00001eb170650 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	Zm00001eb170650_T003	2301	585aa	Zm00001eb170650_P003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7ZXR6	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Zm00001eb170650_T001	2893	480aa	Zm00001eb170650_P001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A804NM12	-	-
-	Zm00001eb170650_T002	2850	511aa	Zm00001eb170650_P002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A804NM13	-	-
-	Zm00001eb170650_T004	1958	473aa	Zm00001eb170650_P004	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A804NM15	-	-

Summary

Statistics

Exons: 13, Coding exons: 9, Transcript length: 2,893 bps, Translation length: 480 residues

Version

Zm00001eb170650_T001

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Transcript: Zm00001eb170650_T001

Summary

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Transcript: Zm00001eb170650_T001

Summary

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