Transcript: Zm00001eb162990_T003

Description

Zm00001e020787

Location

Chromosome 3: 234,340,482-234,348,628 forward strand.

About this transcript

This transcript has 15 exons, is annotated with 9 domains and features, is associated with 421 variant alleles and maps to 32 oligo probes.

Gene

This transcript is a product of gene Zm00001eb162990 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	Zm00001eb162990_T003	2734	674aa	Zm00001eb162990_P003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6NNW6 A0A1D6NNW7 A0A1D6NNX1 A0A1D6NNX7 A0A1D6NNX8 A0A3L6FHH0 B6U4T0	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Zm00001eb162990_T001	2421	674aa	Zm00001eb162990_P001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B6U4T0	-	-
-	Zm00001eb162990_T002	2351	671aa	Zm00001eb162990_P002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6NNX6	-	-

Summary

Statistics

Exons: 15, Coding exons: 13, Transcript length: 2,734 bps, Translation length: 674 residues

Version

Zm00001eb162990_T003

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Transcript: Zm00001eb162990_T003

Summary

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Transcript: Zm00001eb162990_T003

Summary

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