Transcript: Zm00001eb161530_T001

Description

Zm00001e020640

Location

Chromosome 3: 229,368,207-229,371,456 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 12 domains and features, is associated with 847 variant alleles and maps to 32 oligo probes.

Gene

This transcript is a product of gene Zm00001eb161530 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	Zm00001eb161530_T003	2282	577aa	Zm00001eb161530_P003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6NLJ7 A0A3L6FN62 B6UES9	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Zm00001eb161530_T001	2368	444aa	Zm00001eb161530_P001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C0HEN2	-	-
-	Zm00001eb161530_T002	2237	544aa	Zm00001eb161530_P002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-

Summary

Statistics

Exons: 7, Coding exons: 3, Transcript length: 2,368 bps, Translation length: 444 residues

Version

Zm00001eb161530_T001

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Transcript: Zm00001eb161530_T001

Summary

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Transcript: Zm00001eb161530_T001

Summary

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