Transcript: Zm00001eb158690_T001

Description

Zm00001e020346

Location

Chromosome 3: 220,435,407-220,440,423 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 20 domains and features, is associated with 732 variant alleles and maps to 87 oligo probes.

Gene

This transcript is a product of gene Zm00001eb158690 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	Zm00001eb158690_T003	2714	639aa	Zm00001eb158690_P003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Zm00001eb158690_T002	2614	610aa	Zm00001eb158690_P002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6NHM0 A0A1D6NHM1 A0A3L6FH25 C0PGY4	-	-
-	Zm00001eb158690_T001	2531	544aa	Zm00001eb158690_P001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6NHM3	-	-

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 2,531 bps, Translation length: 544 residues

Version

Zm00001eb158690_T001

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Transcript: Zm00001eb158690_T001

Summary

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Transcript: Zm00001eb158690_T001

Summary

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