Transcript: Zm00001eb155150_T001

Description

Zm00001e020000

Location

Chromosome 3: 209,279,754-209,286,634 reverse strand.

About this transcript

This transcript has 15 exons, is annotated with 23 domains and features, is associated with 1090 variant alleles and maps to 67 oligo probes.

Gene

This transcript is a product of gene Zm00001eb155150 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	Zm00001eb155150_T002	1909	453aa	Zm00001eb155150_P002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6NE83 A0A1D6NE84 A0A1D6NE85 A0A3L6FKZ5 B6TD89 Q8L8G4	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Zm00001eb155150_T003	2123	394aa	Zm00001eb155150_P003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6NE88	-	-
-	Zm00001eb155150_T001	1974	412aa	Zm00001eb155150_P001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6NE89 A0A1D6NE91	-	-

Summary

Statistics

Exons: 15, Coding exons: 14, Transcript length: 1,974 bps, Translation length: 412 residues

Version

Zm00001eb155150_T001

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Transcript: Zm00001eb155150_T001

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: Zm00001eb155150_T001

Summary

About Us

Get help

Our sister sites

Follow us