Transcript: Zm00001eb154950_T002

Description

Zm00001e019975

Location

Chromosome 3: 208,260,654-208,284,118 reverse strand.

About this transcript

This transcript has 14 exons, is annotated with 16 domains and features, is associated with 1309 variant alleles and maps to 109 oligo probes.

Gene

This transcript is a product of gene Zm00001eb154950 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	Zm00001eb154950_T003	3917	885aa	Zm00001eb154950_P003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A096UE19 A0A1D6NE29 A0A1D6NE33 A0A3L6FB17	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Zm00001eb154950_T001	3808	885aa	Zm00001eb154950_P001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Zm00001eb154950_T002	3804	885aa	Zm00001eb154950_P002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 14, Coding exons: 13, Transcript length: 3,804 bps, Translation length: 885 residues

Version

Zm00001eb154950_T002

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Transcript: Zm00001eb154950_T002

Summary

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Transcript: Zm00001eb154950_T002

Summary

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