Transcript: Zm00001eb149660_T003

Description

Zm00001e019456

Location

Chromosome 3: 190,529,901-190,534,945 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 11 domains and features, is associated with 59 variant alleles and maps to 46 oligo probes.

Gene

This transcript is a product of gene Zm00001eb149660 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	Zm00001eb149660_T003	2360	553aa	Zm00001eb149660_P003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6N8C9 A0A3L6FCZ0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Zm00001eb149660_T002	3093	425aa	Zm00001eb149660_P002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Zm00001eb149660_T001	3021	401aa	Zm00001eb149660_P001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 2,360 bps, Translation length: 553 residues

Version

Zm00001eb149660_T003

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Transcript: Zm00001eb149660_T003

Summary

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Transcript: Zm00001eb149660_T003

Summary

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