Transcript: Zm00001eb144600_T002

Description

Zm00001e018959

Location

Chromosome 3: 172,058,097-172,067,575 forward strand.

About this transcript

This transcript has 16 exons, is annotated with 17 domains and features and is associated with 1117 variant alleles.

Gene

This transcript is a product of gene Zm00001eb144600 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	Zm00001eb144600_T003	4449	1183aa	Zm00001eb144600_P003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C0PFB6	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Zm00001eb144600_T004	4428	1176aa	Zm00001eb144600_P004	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6N4L3	-	-
-	Zm00001eb144600_T001	4291	1183aa	Zm00001eb144600_P001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C0PFB6	-	-
-	Zm00001eb144600_T002	4277	1183aa	Zm00001eb144600_P002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C0PFB6	-	-

Summary

Statistics

Exons: 16, Coding exons: 14, Transcript length: 4,277 bps, Translation length: 1,183 residues

Version

Zm00001eb144600_T002

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Transcript: Zm00001eb144600_T002

Summary

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Transcript: Zm00001eb144600_T002

Summary

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