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Zea mays (Zm-B73-REFERENCE-NAM-5.0) ▼

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Transcript: Zm00001eb139750_T001

Description

Zm00001e018495

Location

Chromosome 3: 146,081,737-146,093,949 forward strand.

About this transcript

This transcript has 19 exons, is annotated with 7 domains and features, is associated with 719 variant alleles and maps to 65 oligo probes.

Gene

This transcript is a product of gene Zm00001eb139750 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
-Zm00001eb139750_T00250731221aaZm00001eb139750_P002
 
Protein coding
A0A1D6N006 A0A1D6N010 A0A1D6N017
A0A1D6N019 A0A1D6N036 A0A1D6N044
A0A1D6N061 A0A1D6N063 A0A3L6FCA4
-Ensembl Canonical
-Zm00001eb139750_T0014652930aaZm00001eb139750_P001
 
Protein coding
A0A1D6N069 A0A1D6N075 --
-Zm00001eb139750_T00442161221aaZm00001eb139750_P004
 
Protein coding
A0A1D6N061 --
-Zm00001eb139750_T00342101219aaZm00001eb139750_P003
 
Protein coding
A0A1D6N029 A0A1D6N053 --
-Zm00001eb139750_T0053557887aaZm00001eb139750_P005
 
Protein coding
A0A1D6N002 A0A1D6N047 A0A1D6N073
--

Summary

Statistics

Exons: 19, Coding exons: 13, Transcript length: 4,652 bps, Translation length: 930 residues

Version

Zm00001eb139750_T001

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.