Transcript: Zm00001eb123090_T004

Description

Zm00001e016787

Location

Chromosome 3: 13,018,650-13,020,244 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 18 domains and features, is associated with 721 variant alleles and maps to 19 oligo probes.

Gene

This transcript is a product of gene Zm00001eb123090 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	Zm00001eb123090_T003	2001	543aa	Zm00001eb123090_P003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6MKN1 A0A1D6MKN2 A0A3L6FJK5 C4PJN6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Zm00001eb123090_T001	2252	466aa	Zm00001eb123090_P001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Zm00001eb123090_T002	1950	431aa	Zm00001eb123090_P002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Zm00001eb123090_T004	1419	431aa	Zm00001eb123090_P004	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 1,419 bps, Translation length: 431 residues

Version

Zm00001eb123090_T004

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Transcript: Zm00001eb123090_T004

Summary

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Transcript: Zm00001eb123090_T004

Summary

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