Transcript: Zm00001eb115650_T003

Description

Zm00001e011344

Location

Chromosome 2: 236,664,581-236,678,344 reverse strand.

About this transcript

This transcript has 23 exons, is annotated with 18 domains and features and is associated with 98 variant alleles.

Gene

This transcript is a product of gene Zm00001eb115650 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	Zm00001eb115650_T004	3893	1123aa	Zm00001eb115650_P004	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A804MVX6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Zm00001eb115650_T002	4074	1019aa	Zm00001eb115650_P002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A804MVX4	-
-	Zm00001eb115650_T001	4006	1097aa	Zm00001eb115650_P001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A804MVX3	-
-	Zm00001eb115650_T003	3970	1085aa	Zm00001eb115650_P003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A804MVX5	-

Summary

Statistics

Exons: 23, Coding exons: 23, Transcript length: 3,970 bps, Translation length: 1,085 residues

Version

Zm00001eb115650_T003

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Transcript: Zm00001eb115650_T003

Summary

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Transcript: Zm00001eb115650_T003

Summary

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