Transcript: Zm00001eb112990_T004

Description

Zm00001e011116

Location

Chromosome 2: 228,950,305-228,951,909 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 7 domains and features, is associated with 819 variant alleles and maps to 16 oligo probes.

Gene

This transcript is a product of gene Zm00001eb112990 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	Zm00001eb112990_T003	1634	394aa	Zm00001eb112990_P003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6F5M2 A0A3L6FZC8	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Zm00001eb112990_T002	1616	388aa	Zm00001eb112990_P002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
-	Zm00001eb112990_T001	1612	386aa	Zm00001eb112990_P001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B6U9Q9	-	-
-	Zm00001eb112990_T004	1049	289aa	Zm00001eb112990_P004	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 1,049 bps, Translation length: 289 residues

Version

Zm00001eb112990_T004

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Transcript: Zm00001eb112990_T004

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: Zm00001eb112990_T004

Summary

About Us

Get help

Our sister sites

Follow us