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Zea mays (Zm-B73-REFERENCE-NAM-5.0) ▼

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Transcript: Zm00001eb092880_T002

Description

Zm00001e009158

Location

Chromosome 2: 149,088,474-149,091,613 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 16 domains and features, is associated with 692 variant alleles and maps to 100 oligo probes.

Gene

This transcript is a product of gene Zm00001eb092880 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
-Zm00001eb092880_T0062533535aaZm00001eb092880_P006
 
Protein coding
A0A096RFC0 -Ensembl Canonical
-Zm00001eb092880_T0052800478aaZm00001eb092880_P005
 
Protein coding
---
-Zm00001eb092880_T0082679478aaZm00001eb092880_P008
 
Protein coding
---
-Zm00001eb092880_T0032526478aaZm00001eb092880_P003
 
Protein coding
---
-Zm00001eb092880_T0072412532aaZm00001eb092880_P007
 
Protein coding
A0A3L6G4G4 C4J4N1 --
-Zm00001eb092880_T0042318532aaZm00001eb092880_P004
 
Protein coding
A0A3L6G4G4 C4J4N1 --
-Zm00001eb092880_T0012313532aaZm00001eb092880_P001
 
Protein coding
A0A3L6G4G4 A0A3L6GBR7 C4J0W4
C4J4N1 		--
-Zm00001eb092880_T0022275535aaZm00001eb092880_P002
 
Protein coding
A0A096RFC0 C0P960 --

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 2,275 bps, Translation length: 535 residues

Version

Zm00001eb092880_T002

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.