Transcript: Zm00001eb089650_T001

Description

Zm00001e008820

Location

Chromosome 2: 117,456,634-117,462,954 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 5 domains and features, is associated with 377 variant alleles and maps to 42 oligo probes.

Gene

This transcript is a product of gene Zm00001eb089650 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	Zm00001eb089650_T001	1299	206aa	Zm00001eb089650_P001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6EG13 A0A1D6EG18 A0A1D6EG19 A0A1D6EG21 A0A3L6G3T0 B4FFD7	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Zm00001eb089650_T003	1297	146aa	Zm00001eb089650_P003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6EG22	-	-
-	Zm00001eb089650_T002	1160	182aa	Zm00001eb089650_P002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,299 bps, Translation length: 206 residues

Version

Zm00001eb089650_T001

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Transcript: Zm00001eb089650_T001

Summary

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Transcript: Zm00001eb089650_T001

Summary

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