Transcript: Zm00001eb078160_T004

Description

Zm00001e007657

Location

Chromosome 2: 32,918,237-32,919,128 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 7 domains and features and is associated with 391 variant alleles.

Gene

This transcript is a product of gene Zm00001eb078160 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	Zm00001eb078160_T002	840	216aa	Zm00001eb078160_P002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Zm00001eb078160_T001	939	194aa	Zm00001eb078160_P001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6E6U3 A0A1D6E6U4 A0A3L6FNX9	-	-
-	Zm00001eb078160_T003	906	183aa	Zm00001eb078160_P003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
-	Zm00001eb078160_T004	570	189aa	Zm00001eb078160_P004	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 570 bps, Translation length: 189 residues

Version

Zm00001eb078160_T004

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Transcript: Zm00001eb078160_T004

Summary

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Transcript: Zm00001eb078160_T004

Summary

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