Transcript: Zm00001eb077900_T003

Description

Zm00001e007629

Location

Chromosome 2: 31,874,747-31,889,557 forward strand.

About this transcript

This transcript has 15 exons, is annotated with 14 domains and features, is associated with 1132 variant alleles and maps to 53 oligo probes.

Gene

This transcript is a product of gene Zm00001eb077900 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	Zm00001eb077900_T002	5239	1441aa	Zm00001eb077900_P002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6E6C0 A0A1D6E6C3 A0A1D6E6C6 A0A1D6E6C9 A0A1D6E6D0 A0A1D6E6D3 A0A1D6E6D4 A0A3L6G3N8	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Zm00001eb077900_T001	5191	1425aa	Zm00001eb077900_P001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
-	Zm00001eb077900_T003	4476	1131aa	Zm00001eb077900_P003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6E6E1 A0A1D6E6E5 A0A1D6E6E6 A0A1D6E6F3	-	-

Summary

Statistics

Exons: 15, Coding exons: 15, Transcript length: 4,476 bps, Translation length: 1,131 residues

Version

Zm00001eb077900_T003

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Transcript: Zm00001eb077900_T003

Summary

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Transcript: Zm00001eb077900_T003

Summary

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