Transcript: Zm00001eb072940_T001

Description

Zm00001e007146

Location

Chromosome 2: 15,517,769-15,524,000 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 15 domains and features, is associated with 538 variant alleles and maps to 92 oligo probes.

Gene

This transcript is a product of gene Zm00001eb072940 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	Zm00001eb072940_T001	3955	1039aa	Zm00001eb072940_P001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6E1W8 A0A1D6E1W9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Zm00001eb072940_T002	4087	945aa	Zm00001eb072940_P002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6JBM7	-
-	Zm00001eb072940_T003	3733	1031aa	Zm00001eb072940_P003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6E1W6 A0A1D6E1W7 A0A3L6FPV8	-

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 3,955 bps, Translation length: 1,039 residues

Version

Zm00001eb072940_T001

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Transcript: Zm00001eb072940_T001

Summary

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Transcript: Zm00001eb072940_T001

Summary

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