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Zea mays (Zm-B73-REFERENCE-NAM-5.0) ▼

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Transcript: Zm00001eb070400_T004

Description

Zm00001e006905

Location

Chromosome 2: 9,565,798-9,579,223 forward strand.

About this transcript

This transcript has 29 exons, is annotated with 51 domains and features, is associated with 1421 variant alleles and maps to 70 oligo probes.

Gene

This transcript is a product of gene Zm00001eb070400 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
-Zm00001eb070400_T00161941627aaZm00001eb070400_P001
 
Protein coding
A0A1D6DZ27 A0A1D6DZ34 A0A1D6DZ41
A0A1D6DZ43 A0A1D6DZ45 A0A1D6DZ51
A0A1D6DZ56 A0A1D6DZ57 A0A1D6DZ59
A0A1D6DZ67 A0A3L6FSD6 		-Ensembl Canonical
-Zm00001eb070400_T00460401620aaZm00001eb070400_P004
 
Protein coding
---
-Zm00001eb070400_T00358311627aaZm00001eb070400_P003
 
Protein coding
A0A1D6DZ57 --
-Zm00001eb070400_T00555791627aaZm00001eb070400_P005
 
Protein coding
A0A1D6DZ57 --
-Zm00001eb070400_T00254871627aaZm00001eb070400_P002
 
Protein coding
A0A1D6DZ57 --

Summary

Statistics

Exons: 29, Coding exons: 28, Transcript length: 6,040 bps, Translation length: 1,620 residues

Version

Zm00001eb070400_T004

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.