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Zea mays (Zm-B73-REFERENCE-NAM-5.0) ▼

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Transcript: Zm00001eb061640_T002

Description

Zm00001e006082

Location

Chromosome 1: 297,328,707-297,331,204 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 8 domains and features, is associated with 344 variant alleles and maps to 36 oligo probes.

Gene

This transcript is a product of gene Zm00001eb061640 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtFlags
-Zm00001eb061640_T0051404253aaZm00001eb061640_P005
 
Protein coding
A0A1D6L8G1 A0A1D6L8G3 A0A317YL88
Ensembl Canonical
-Zm00001eb061640_T0091616251aaZm00001eb061640_P009
 
Protein coding
B4FEU4 C0P355 -
-Zm00001eb061640_T0061437207aaZm00001eb061640_P006
 
Protein coding
--
-Zm00001eb061640_T0081385195aaZm00001eb061640_P008
 
Protein coding
B4FJU4 -
-Zm00001eb061640_T0071362214aaZm00001eb061640_P007
 
Protein coding
B4FJY2 -
-Zm00001eb061640_T0101323206aaZm00001eb061640_P010
 
Protein coding
B4FUT8 B6TLM2 B8A3N1
-
-Zm00001eb061640_T0021293216aaZm00001eb061640_P002
 
Protein coding
--
-Zm00001eb061640_T0041290215aaZm00001eb061640_P004
 
Protein coding
--
-Zm00001eb061640_T0011277207aaZm00001eb061640_P001
 
Protein coding
--
-Zm00001eb061640_T0031263206aaZm00001eb061640_P003
 
Protein coding
--

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 1,293 bps, Translation length: 216 residues

Version

Zm00001eb061640_T002

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.