Transcript: Zm00001eb057490_T001 phyC1-202

Location

Chromosome 1: 283,692,313-283,697,406 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 46 domains and features and is associated with 389 variant alleles.

Gene

This transcript is a product of gene Zm00001eb057490 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
phyC1-201	Zm00001eb057490_T002	4241	1135aa	Zm00001eb057490_P002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6XFQ1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
phyC1-202	Zm00001eb057490_T001	4046	1070aa	Zm00001eb057490_P001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A804M430	-
phyC1-203	Zm00001eb057490_T003	3239	920aa	Zm00001eb057490_P003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6L4T4	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 4,046 bps, Translation length: 1,070 residues

Version

Zm00001eb057490_T001

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Transcript: Zm00001eb057490_T001 phyC1-202

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: Zm00001eb057490_T001 phyC1-202

Summary

About Us

Get help

Our sister sites

Follow us