Transcript: Zm00001eb052690_T003

Description

Zm00001e005221

Location

Chromosome 1: 265,537,443-265,542,858 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 8 domains and features, is associated with 709 variant alleles and maps to 34 oligo probes.

Gene

This transcript is a product of gene Zm00001eb052690 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	Zm00001eb052690_T003	1123	284aa	Zm00001eb052690_P003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6KZ58 A0A317Y1H3 A0A317Y389 B4F8K7 B6TU34	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Zm00001eb052690_T001	1394	239aa	Zm00001eb052690_P001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
-	Zm00001eb052690_T002	1163	189aa	Zm00001eb052690_P002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B4FQ00	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 1,123 bps, Translation length: 284 residues

Version

Zm00001eb052690_T003

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Transcript: Zm00001eb052690_T003

Summary

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Transcript: Zm00001eb052690_T003

Summary

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