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Zea mays (Zm-B73-REFERENCE-NAM-5.0) ▼

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Transcript: Zm00001eb045420_T003

Description

Zm00001e004534

Location

Chromosome 1: 235,511,301-235,527,222 reverse strand.

About this transcript

This transcript has 12 exons, is annotated with 15 domains and features, is associated with 1002 variant alleles and maps to 26 oligo probes.

Gene

This transcript is a product of gene Zm00001eb045420 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
-Zm00001eb045420_T0013329701aaZm00001eb045420_P001
 
Protein coding
A0A096R6U6 A0A1D6KSL8 A0A1D6KSL9
A0A1D6KSN2 A0A1D6KSN7 A0A317Y9P4
-Ensembl Canonical
-Zm00001eb045420_T0024066550aaZm00001eb045420_P002
 
Protein coding
A0A1D6KSM6 A0A1D6KSN6 --
-Zm00001eb045420_T0042820701aaZm00001eb045420_P004
 
Protein coding
A0A096R6U6 --
-Zm00001eb045420_T0032780701aaZm00001eb045420_P003
 
Protein coding
A0A096R6U6 --
-Zm00001eb045420_T0052318550aaZm00001eb045420_P005
 
Protein coding
A0A1D6KSM6 --

Summary

Statistics

Exons: 12, Coding exons: 11, Transcript length: 2,780 bps, Translation length: 701 residues

Version

Zm00001eb045420_T003

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.