Transcript: Zm00001eb035640_T003

Description

Zm00001e003591

Location

Chromosome 1: 194,732,802-194,748,243 forward strand.

About this transcript

This transcript has 12 exons, is annotated with 13 domains and features, is associated with 971 variant alleles and maps to 85 oligo probes.

Gene

This transcript is a product of gene Zm00001eb035640 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	Zm00001eb035640_T002	3866	1086aa	Zm00001eb035640_P002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A060D2B1 A0A1D6KJC3 A0A1D6KJC5 A0A1D6KJC7 A0A317Y7W2 D9HNS8	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Zm00001eb035640_T003	3775	838aa	Zm00001eb035640_P003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6KJC9	-	-
-	Zm00001eb035640_T001	3312	1039aa	Zm00001eb035640_P001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6JH60	-	-

Summary

Statistics

Exons: 12, Coding exons: 7, Transcript length: 3,775 bps, Translation length: 838 residues

Version

Zm00001eb035640_T003

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Transcript: Zm00001eb035640_T003

Summary

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Transcript: Zm00001eb035640_T003

Summary

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