Transcript: Zm00001eb029660_T002

Description

Zm00001e003009

Location

Chromosome 1: 161,674,062-161,678,409 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 19 domains and features, is associated with 3 variant alleles and maps to 13 oligo probes.

Gene

This transcript is a product of gene Zm00001eb029660 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	Zm00001eb029660_T001	3304	700aa	Zm00001eb029660_P001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6DQJ4 A0A1D6MWP1 A0A1D6MWQ1 A0A1X7YFC2 A0A1X7YFC7 A0A1X7YFF9 A0A1X7YFG2 A0A1X7YFG7 A0A1X7YFH2 A0A317Y652	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Zm00001eb029660_T002	3576	573aa	Zm00001eb029660_P002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1X7YFD0 A0A1X7YFD4 A0A1X7YFH6 B4FD06	-
-	Zm00001eb029660_T003	2161	555aa	Zm00001eb029660_P003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1X7YFC5	-

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 3,576 bps, Translation length: 573 residues

Version

Zm00001eb029660_T002

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Transcript: Zm00001eb029660_T002

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: Zm00001eb029660_T002

Summary

About Us

Get help

Our sister sites

Follow us