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Zea mays (Zm-B73-REFERENCE-NAM-5.0) ▼

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Transcript: Zm00001eb009100_T003

Description

Zm00001e000881

Location

Chromosome 1: 27,978,753-27,987,790 reverse strand.

About this transcript

This transcript has 21 exons, is annotated with 12 domains and features, is associated with 852 variant alleles and maps to 26 oligo probes.

Gene

This transcript is a product of gene Zm00001eb009100 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
-Zm00001eb009100_T0052853712aaZm00001eb009100_P005
 
Protein coding
--Ensembl Canonical
-Zm00001eb009100_T0023048645aaZm00001eb009100_P002
 
Protein coding
---
-Zm00001eb009100_T0032950711aaZm00001eb009100_P003
 
Protein coding
A0A1D6JTP0 A0A1D6JTP1 A0A1D6JTP3
A0A1D6JTP7 A0A1D6JTP8 A0A1D6JTQ0
A0A317YIF5 		--
-Zm00001eb009100_T0042896693aaZm00001eb009100_P004
 
Protein coding
---
-Zm00001eb009100_T0012893692aaZm00001eb009100_P001
 
Protein coding
A0A1D6JTQ4 A0A1D6JTQ5 --
-Zm00001eb009100_T0062524693aaZm00001eb009100_P006
 
Protein coding
A0A1D6JTQ9 A0A1D6JTR1 A0A1D6PGG0
A0A1D6PGP4 		--

Summary

Statistics

Exons: 21, Coding exons: 21, Transcript length: 2,950 bps, Translation length: 711 residues

Version

Zm00001eb009100_T003

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.