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Zea mays (Zm-B73-REFERENCE-NAM-5.0) ▼

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Transcript: Zm00001eb008790_T004

Description

Zm00001e000857

Location

Chromosome 1: 27,037,292-27,040,248 reverse strand.

About this transcript

This transcript has 11 exons, is annotated with 19 domains and features, is associated with 699 variant alleles and maps to 48 oligo probes.

Gene

This transcript is a product of gene Zm00001eb008790 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
-Zm00001eb008790_T0022749580aaZm00001eb008790_P002
 
Protein coding
A0A1D6JTC6 A0A1D6JTC9 A0A317YG53
-Ensembl Canonical
-Zm00001eb008790_T0012774509aaZm00001eb008790_P001
 
Protein coding
---
-Zm00001eb008790_T0032668553aaZm00001eb008790_P003
 
Protein coding
A0A1D6JTD0 C0PJP2 --
-Zm00001eb008790_T0062147407aaZm00001eb008790_P006
 
Protein coding
A0A1D6JTC8 --
-Zm00001eb008790_T0051842380aaZm00001eb008790_P005
 
Protein coding
C0PIM5 --
-Zm00001eb008790_T0041822380aaZm00001eb008790_P004
 
Protein coding
C0PIM5 --

Summary

Statistics

Exons: 11, Coding exons: 9, Transcript length: 1,822 bps, Translation length: 380 residues

Version

Zm00001eb008790_T004

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.