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Zea mays (Zm-B73-REFERENCE-NAM-5.0) ▼

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Transcript: Zm00001eb007090_T003

Description

Zm00001e000702

Location

Chromosome 1: 20,781,513-20,790,115 forward strand.

About this transcript

This transcript has 16 exons, is annotated with 10 domains and features, is associated with 410 variant alleles and maps to 67 oligo probes.

Gene

This transcript is a product of gene Zm00001eb007090 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
-Zm00001eb007090_T0042917769aaZm00001eb007090_P004
 
Protein coding
A0A1D6JRD5 A0A1D6JRD6 A0A1D6JRD7
A0A1D6JRF9 A0A1D6JRG5 A0A317Y551
C0HFL9 C0PIV7 		-Ensembl Canonical
-Zm00001eb007090_T0013255602aaZm00001eb007090_P001
 
Protein coding
---
-Zm00001eb007090_T0023245395aaZm00001eb007090_P002
 
Protein coding
A0A1D6JRD8 --
-Zm00001eb007090_T0033217395aaZm00001eb007090_P003
 
Protein coding
A0A1D6JRD8 A0A1D6JRE2 --
-Zm00001eb007090_T0052040423aaZm00001eb007090_P005
 
Protein coding
A0A1D6JRF8 C4J116 --

Summary

Statistics

Exons: 16, Coding exons: 6, Transcript length: 3,217 bps, Translation length: 395 residues

Version

Zm00001eb007090_T003

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.