Transcript: Zm00001eb006700_T003

Description

Zm00001e000659

Location

Chromosome 1: 19,461,468-19,462,984 forward strand.

About this transcript

This transcript has 2 exons, is annotated with 15 domains and features, is associated with 538 variant alleles and maps to 32 oligo probes.

Gene

This transcript is a product of gene Zm00001eb006700 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	Zm00001eb006700_T001	1788	326aa	Zm00001eb006700_P001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A096S6J0 A0A317Y3B2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Zm00001eb006700_T002	1679	326aa	Zm00001eb006700_P002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A096S6J0 A0A1D6FQ88 A0A317Y3B2 B6TID5	-
-	Zm00001eb006700_T003	1348	283aa	Zm00001eb006700_P003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6JR59	-

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 1,348 bps, Translation length: 283 residues

Version

Zm00001eb006700_T003

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Transcript: Zm00001eb006700_T003

Summary

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Transcript: Zm00001eb006700_T003

Summary

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