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Zea mays (Zm-B73-REFERENCE-NAM-5.0) ▼

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Transcript: Zm00001eb003830_T009

Description

Zm00001e000381

Location

Chromosome 1: 10,549,979-10,553,756 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 17 domains and features, is associated with 542 variant alleles and maps to 85 oligo probes.

Gene

This transcript is a product of gene Zm00001eb003830 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
-Zm00001eb003830_T0092852556aaZm00001eb003830_P009
 
Protein coding
A0A1D6JNQ5 B6U1B5 B6U1G3
-Ensembl Canonical
-Zm00001eb003830_T0012805535aaZm00001eb003830_P001
 
Protein coding
A0A317YD03 B8A307 --
-Zm00001eb003830_T0062766556aaZm00001eb003830_P006
 
Protein coding
B6U1B5 --
-Zm00001eb003830_T0052680535aaZm00001eb003830_P005
 
Protein coding
A0A317YD03 B8A307 --
-Zm00001eb003830_T0072665535aaZm00001eb003830_P007
 
Protein coding
A0A317YD03 B8A307 --
-Zm00001eb003830_T0022661556aaZm00001eb003830_P002
 
Protein coding
B6U1B5 --
-Zm00001eb003830_T0042619556aaZm00001eb003830_P004
 
Protein coding
B6U1B5 --
-Zm00001eb003830_T0032534535aaZm00001eb003830_P003
 
Protein coding
A0A317YD03 B8A307 --
-Zm00001eb003830_T0082525556aaZm00001eb003830_P008
 
Protein coding
B6U1B5 --

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 2,852 bps, Translation length: 556 residues

Version

Zm00001eb003830_T009

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.