Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Biological process
- GO: Cellular component
- GO: Molecular function
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

Ensembl Plants is produced in collaboration with Gramene

.

Gene: TRIDC5BG035080

.

Description

DNA mismatch repair protein MSH6 [Source:Projected from Arabidopsis thaliana (AT4G02070) UniProtKB/Swiss-Prot;Acc:O04716]

Location

Chromosome 5B: 386,017,095-386,028,766 forward strand.

About this gene

This gene has 10 transcripts (splice variants), 149 orthologues and 11 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	Flags
-	TRIDC5BG035080.2	4321	1255aa	TRIDC5BG035080.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	TRIDC5BG035080.5	4196	1034aa	TRIDC5BG035080.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	TRIDC5BG035080.4	4094	821aa	TRIDC5BG035080.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	TRIDC5BG035080.8	4007	597aa	TRIDC5BG035080.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	TRIDC5BG035080.3	3808	1142aa	TRIDC5BG035080.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	TRIDC5BG035080.1	3808	842aa	TRIDC5BG035080.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	TRIDC5BG035080.7	3619	826aa	TRIDC5BG035080.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	TRIDC5BG035080.9	1668	400aa	TRIDC5BG035080.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	TRIDC5BG035080.10	1517	330aa	TRIDC5BG035080.10	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	TRIDC5BG035080.6	860	286aa	TRIDC5BG035080.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-

.

Summary

.

.