Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: TraesCS1B02G083900

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Description

SUMO (small ubiquitin-related modifier) E3-ligase, Abiotic stress response, Stress adaptatio [Source: Projected from Oryza sativa (Os05g0125000)]

Location

Chromosome 1B: 68,067,908-68,084,234 forward strand.

About this gene

This gene has 8 transcripts (splice variants), 238 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	TraesCS1B02G083900.5	3494	874aa	TraesCS1B02G083900.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B5YTL6 A0A9R1IP90	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	TraesCS1B02G083900.4	3491	873aa	TraesCS1B02G083900.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B5YSA9 A0A9R1IP26	-
-	TraesCS1B02G083900.3	3488	872aa	TraesCS1B02G083900.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B5YSA7 A0A9R1IPJ5	-
-	TraesCS1B02G083900.6	3392	840aa	TraesCS1B02G083900.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B5YSL4 A0A9R1D9P6	-
-	TraesCS1B02G083900.2	3392	840aa	TraesCS1B02G083900.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B5YTE3 A0A9R1D9R2	-
-	TraesCS1B02G083900.7	2948	865aa	TraesCS1B02G083900.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B5YTE7 A0A9R1IPF9	-
-	TraesCS1B02G083900.1	2894	847aa	TraesCS1B02G083900.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B5YSK9 A0A9R1D9Q3	-
-	TraesCS1B02G083900.8	2307	595aa	TraesCS1B02G083900.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B5YSB2 A0A9R1D9P3	-

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Summary

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