Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: TraesCS1A02G012500

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Description

Vacuolar sorting protein 39 [Source:Projected from Arabidopsis thaliana (AT1G22860) TAIR;Acc:AT1G22860]

Location

Chromosome 1A: 7,178,200-7,184,960 forward strand.

About this gene

This gene has 4 transcripts (splice variants), 134 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	TraesCS1A02G012500.4	3420	940aa	TraesCS1A02G012500.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B5XSX8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	TraesCS1A02G012500.2	3416	831aa	TraesCS1A02G012500.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B5XTF8	-
-	TraesCS1A02G012500.1	3407	828aa	TraesCS1A02G012500.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B5XTD0	-
-	TraesCS1A02G012500.3	2742	866aa	TraesCS1A02G012500.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B5XUC8	-

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Summary

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