Transcript: PGSC0003DMT400015403
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Description
DNA binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400006006]
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- PGSC0003DMT400015404 3310 705aa Gene/transcipt that contains an open reading frame (ORF). Protein coding
M1A5Z3 A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.html Ensembl Canonical, - PGSC0003DMT400015403 3566 266aa Gene/transcipt that contains an open reading frame (ORF). Protein coding
M1A5Z2 - - PGSC0003DMT400015406 2624 474aa Gene/transcipt that contains an open reading frame (ORF). Protein coding
M1A5Z4 -
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Codons Alternating codons Alternating codons Exons Variants Other Markup ▼ ▲
1 AAAAGCCCCAAAAATTTTACCAAACCCTAATTTCTCACTCCGAAACAGACGTTCTTCAAG 60
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61 ACTTTTTCCCTCCTCTCCTCTTCTTCTTTTCCTCTTTCTCTCTCAACAAAAATACAACTC 120
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121 CTCTTTCCCTCATCGTCTCTGTATCTCTCTTCGCTTCTCTATGGAATTTTGTTTATTGAT 180
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181 AACATAGTAGACGTCCGATCTGGGAGTATTCGGTTCAGATCTGTGACGAGGATTGAGATT 240
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241 TCCGACCTCACGCGCCGAGATCTGGGTGATACGCGCCGAGATCAGTTTAAAGGAGGTATG 300
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301 GTAGTGAATGGTAGGCCGATGAAGAGGTTGAAGAGGAGAGTAACGGCAGACCTCAACGAT 360
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361 TTCCTTACCTTTCCCGACGACGGTAATACCGCCGGTACGGGACCGTTCAGGACGACGGTG 420
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421 AAGGAGTTTTTATCGAAACATGCGCTTTTGCCGCCGCCTTCTTCGTTGTTTCCTCACCTT 480
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481 CTGACGTGGCAGATCCTCTTCCGCGTCGGAGACCTCACTGACGGCGACGGTAACGGCAAC 540
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541 GGCGACTCTTCTCCGTCTGTTGTCTGCCTCGATGTTATCGAAGAAGACGTCGCCAGATGT 600
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601 AGATCCGTTTATTGCGACCAGTGCCGAGTCGTTG GTTGGAGCAGTAATCCAGTTTGTGCA 660
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661 AAGCGTTTCCATTTTATTATTAAGGCTGATGGAAACTCAGTTGGGGGTTATAACAAATCC 720
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721 TGTGCTGGGTGTGGTGAAGCCCTTCACTTATCCGAGGCTAG GTGCAAGTCATGCAATCAT 780
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781 GTCATGACCACAGAAGATGTTGAAGATTGGATGTATCATCAGTTAGAGGATACCAGTCAT 840
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841 CTTCTGCATGGTGTGATTCATGCCAATGGCTATGGACATCTTCTCAGGGTAAACGGTAGA 900
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901 GAAGGTGGATCCAGGGTGCTTTCTGGAAGTCATATAATGAATTTCTGGGATAGGCTCTGT 960
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961 AAAGTCCTTGGAGCAAGGTAAGCATAATTTGTATTAGATGTTATGTCGTTGGAATAATAA 1020
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1021 AATTTGACATGTTACCCCAAGTACTGAAGGCAATATTCTATAGTTTGGTTCTCCAATGAG 1080
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1081 CTATATTTGATGATTTAGTCGTGTATTTCTGTATGATCAGAAAAATCAGCGTGATGGATG 1140
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1141 TTTCAAAGAAGTATGGTTTGGAATTACGCCTAATGCATGCCATCACAAAAGGTCACCCAT 1200
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1201 GGTATGGTAAATGGGATTATCAGTTTGGCGCTGGTAGTTTTGCTCTGACTCAAGATTCTT 1260
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1261 ATAGACAAGCTGTAGAGAACCTTTCTTCTCTGCCCTTGACCATCTTTCTATCTCAAGGAC 1320
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1321 GGAAGCCTCGCACTCGTCTGCAGGACTTGATTTCATTTTATCAGTCCTTGTCAGATAGTG 1380
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1381 AACTTGTAAATATTAGAGACCTTTTTCTTTTCTTAACTAGTTCAATCCGTGATGCCCATA 1440
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1441 AACCTGGCTCAGGAGCTGATGAGGTCACCTGTAAGAAGCGTAAAACTTGCAACTCCAAGG 1500
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1501 TCTTATGTGCATGGACCAGTACTGACATTTTACGTGTTGAAGAAGCAATGTTTAGAGTAC 1560
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1561 TACGGGCTGTCTCTGGGCCCAATTGGGTGAGCTGGCGTGCTCTTAGAGGTGCTGTGTGTA 1620
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1621 AAGCGGGTCCTCCTGAACTCCTTGATTATTGCCTAAAGGCACTCCATGGAAAGCAGGCAG 1680
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1681 CTGACGGACTGGTTGTCAATTCCCGCAGCGTTTCTGGTTCTGGTGCTATGGAGTATAAGT 1740
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1741 CAGTAAATCCATTCTTCTTTGAGAACTCAATATTTACAATTTTGTATAAGTCACACTGTG 1800
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1801 TGCATTATAGTTTTTTTGCTTTCTCACTGATTTTTCTCTGACTTAATGCAGAATTGAGCG 1860
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1861 TTGCAACTCA ATG GTT AAT GTG AAT ACA AAA GAG AAT GGA TTG CCT TGT ACT CCG AAC CT 1920
..........ATGGTTAATGTGAATACAAAAGAGAATGGATTGCCTTGTACTCCGAACCT 50
..........-M--V--N--V--N--T--K--E--N--G--L--P--C--T--P--N--L 17
1921 C CCA TCT GAG GAA CAT CTG CGT CGA GAT CTG AAG TAC TTG TAC GAT TGC ATG CTA AAC CC 1980
51 CCCATCTGAGGAACATCTGCGTCGAGATCTGAAGTACTTGTACGATTGCATGCTAAACCC 110
17 --P--S--E--E--H--L--R--R--D--L--K--Y--L--Y--D--C--M--L--N--P 37
1981 A TCG ACA ATG TCT AAT CAT GTT CCC TTA ATC AAA AGG GTA GTG GCA GTT GAC TCT GCT AC 2040
111 ATCGACAATGTCTAATCATGTTCCCTTAATCAAAAGGGTAGTGGCAGTTGACTCTGCTAC 170
37 --S--T--M--S--N--H--V--P--L--I--K--R--V--V--A--V--D--S--A--T 57
2041 T ACC GTT CTT GAT TGC AAG CAA TTT TTG AAG GTA TAT CAG CCT GAA AGA TTC TTG CCT AT 2100
171 TACCGTTCTTGATTGCAAGCAATTTTTGAAGGTATATCAGCCTGAAAGATTCTTGCCTAT 230
57 --T--V--L--D--C--K--Q--F--L--K--V--Y--Q--P--E--R--F--L--P--I 77
2101 C CCA AAA TCA GAT GCA ATC CAA GTA CTA TGT GAG GTG GAC ATC ATG GAA CAA TCT GAT GT 2160
231 CCCAAAATCAGATGCAATCCAAGTACTATGTGAGGTGGACATCATGGAACAATCTGATGT 290
77 --P--K--S--D--A--I--Q--V--L--C--E--V--D--I--M--E--Q--S--D--V 97
2161 A CAT TCC AGA AAC CCT CCT CCG GAA TTA TTG ATT CTC CCC TCG GAT GCT ACC ATT TCT GA 2220
291 ACATTCCAGAAACCCTCCTCCGGAATTATTGATTCTCCCCTCGGATGCTACCATTTCTGA 350
97 --H--S--R--N--P--P--P--E--L--L--I--L--P--S--D--A--T--I--S--D 117
2221 C TTG AAG GCA GAG GCA TCA AGG ACA TTT CAA GAT GTA TAC TTG ATG TTC AGA AGA TTC CA 2280
351 CTTGAAGGCAGAGGCATCAAGGACATTTCAAGATGTATACTTGATGTTCAGAAGATTCCA 410
117 --L--K--A--E--A--S--R--T--F--Q--D--V--Y--L--M--F--R--R--F--Q 137
2281 A GCT GAT GAG CTA GTT GGA TAT GGT GGT GTG AAT GAA TCT ACT CAG GTC AAA CTC CTT CT 2340
411 AGCTGATGAGCTAGTTGGATATGGTGGTGTGAATGAATCTACTCAGGTCAAACTCCTTCT 470
137 --A--D--E--L--V--G--Y--G--G--V--N--E--S--T--Q--V--K--L--L--L 157
2341 A GGA TCT GCT GAA TTT GTT ACA GTC AGA GGA AAA TTC TTG GGG AAA AAT GGG CTG AGT AA 2400
471 AGGATCTGCTGAATTTGTTACAGTCAGAGGAAAATTCTTGGGGAAAAATGGGCTGAGTAA 530
157 --G--S--A--E--F--V--T--V--R--G--K--F--L--G--K--N--G--L--S--K 177
2401 G TAT AGA ATG GAA AGA GGA ATG GAG AGA TGG ACT GTA GAT TGC TTC TGT GGA GCA AAG GA 2460
531 GTATAGAATGGAAAGAGGAATGGAGAGATGGACTGTAGATTGCTTCTGTGGAGCAAAGGA 590
177 --Y--R--M--E--R--G--M--E--R--W--T--V--D--C--F--C--G--A--K--D 197
2461 T GAT GAC GGA GAG AGG ATG TTA GCT TGT GAT GTA TGC AGT GTT TGG CAG CAC ACC AGA TG 2520
591 TGATGACGGAGAGAGGATGTTAGCTTGTGATGTATGCAGTGTTTGGCAGCACACCAGATG 650
197 --D--D--G--E--R--M--L--A--C--D--V--C--S--V--W--Q--H--T--R--C 217
2521 T GCC GGT ATC CCC GAC TTG GAT GCT GTT CCT GCC AAG TTC ATT TGT CTT AGG TGC AGA TG 2580
651 TGCCGGTATCCCCGACTTGGATGCTGTTCCTGCCAAGTTCATTTGTCTTAGGTGCAGATG 710
217 --A--G--I--P--D--L--D--A--V--P--A--K--F--I--C--L--R--C--R--C 237
2581 T CTT AGT AAG ACT ATG AAT ACA AGC GGT AAT TGT AAG GAT GAA TCA GTT GCT GGT GTG GG 2640
711 TCTTAGTAAGACTATGAATACAAGCGGTAATTGTAAGGATGAATCAGTTGCTGGTGTGGG 770
237 --L--S--K--T--M--N--T--S--G--N--C--K--D--E--S--V--A--G--V--G 257
2641 A TTA GGG AAG AAC CTG GCT CAT GTT GTC TAG AGCGTGCTGGGATTTTTAATAATGCTGTA 2700
771 ATTAGGGAAGAACCTGGCTCATGTTGTCTAG............................. 801
257 --L--G--K--N--L--A--H--V--V--*-............................. 266
2701 ATAT G TGGGTTCAATTATTGAATTGAGACCTGATCAAGCATATAATGTAATACCAAGTCT 2760
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2761 TAATTATGGCTTTGGAGAGTAATGGTGTATGAGATTGGAGGAAGGCTCTATTTGAG TAAA 2820
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2821 TGGGGGTCTCAGTTCTTGCTTGCATCATTGGTGCTGAGAATATTTTGCAGAATCTAGGAT 2880
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2881 GTTCATGGGTGAAATTTTGAACTACCAGTCGAACTTTTAAAACTTGGAAGATCTAAGATG 2940
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2941 TTGTGATCAGCCAACTCCCTCCTAATCAAAGATGATTTTACGATGTCTGGACTTCTATAT 3000
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3001 GTGATTTTTGAAATTTTGCTGGTGACAACACAATTCATCTTCTTCCTGAGTTGTGTTTCC 3060
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3061 AGGATACAGGCTAGCATGCTAATGAGGACTAGCCTGTGCTGCAATTAACTGAATTTAGGC 3120
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3121 AAAGATAAGCATACAGGGAGGGTTTATCAAGTTTTTCAACAAAGCGTCATTTGGCTTCTT 3180
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3181 ACATTCCAATGTGGAGACAAACAAGTGCTGTCTGAGCGTTGATAGAGTTCACAAGATACG 3240
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3241 TGCAGAACAATCGTGCTGATAATGTATATAACTCCTTTTCTTTTTTAAATACCCTCGATG 3300
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3301 TCAAAGATGTGGCAAGCTAAAGAATGTAAGTTTGCTTTACATTCGAGGAGTATTTTTACA 3360
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3361 ATCGTGTGTTGGTTGAGACGTGTGTATCTGTGTGAATTTCTAGCCATATTTACGCAATGA 3420
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3421 GGACTAGCCTCTACTCAAATGTCATTTCTCTCTATTTAATGGAATTAGAAACAGTGGAAC 3480
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3481 AATGCTTTTTCCTTATATTCAGAAATGTACATTATGATGGTGCTTATGTTGCCTTCATAA 3540
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3541 ATTTCAAGTCTTGTTTAGGGTTTAAC 3566
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